The next meeting of Galaxy-qld users is scheduled on March 1, 2017.
Where: UQ St Lucia campus, Queensland Bioscience Precinct (QBP/IMB Building 80), Small Seminar Room 3.146 (access via ramp from Chancellor’s Place).
When: March 1, 2017, Wednesday, 10:00 AM to 11:00 AM
Topic: custom reference genomes in Galaxy.
Galaxy-qld offers 17 built-in genome assemblies with precomputed indices. Users also can upload and use custom reference genomes. Some tools in Galaxy expect the ‘dataset’ attribute on input datasets. To use such tools with data linked to a custom reference genome, users have to create a Custom Build and assign datasets to the Custom Build. During the meeting we will create a Custom Build for a microbial genome and visualise aligned reads in Trackster.
Any questions? Email Igor at firstname.lastname@example.org
Slides from the meeting are available for download (link).